PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gorai.009G279300.1
Common NameB456_009G279300, LOC105771040
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bHLH
Protein Properties Length: 1002aa    MW: 114011 Da    PI: 4.6728
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gorai.009G279300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5177444.5421191IPR011684Protein Networked (NET), actin-binding (NAB) domain
PfamPF077651.9E-341285IPR011684Protein Networked (NET), actin-binding (NAB) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005886Cellular Componentplasma membrane
GO:0003779Molecular Functionactin binding
Sequence ? help Back to Top
Protein Sequence    Length: 1002 aa     Download sequence    Send to blast
MMLQKVASNA YSWWWASHIR TKQSKWLEQN LHDVEEKVSN MLEIIDDDGD SFAQRANMYY  60
RKRPELLAIV EDTYRAYRAL AERFDYLSRD LQSANRTIAT VFPDQVPYSL HDEDDENSCL  120
VLTSSSLNKS KSLKPGSRVP SPKTDFRSQS MLLLRKGQLK KAFSSAKAAS SLNSGLSKEE  180
ALEEINKLQK EILEMQTERE LVKNSYEQGY NKLCEIENDI TEKQKRIYSL QDEYDIRSAI  240
DDNEARILMA NRVLKTCQES LVKLQETHEQ STEEGRVESK RIKKVNEAFE ALRKKFNSPQ  300
TDQQKQKKAS SARDVDNMVY EFNSAEKERE YMELLQKEIE EKLELDSSSS LTMSQLADKI  360
DDLVQRVVNM ETAVFSENAS VKRLKSDADE LQEHVKSLEE DEEVLAEGSD SMEQRISVLE  420
GELSGVKELL KTIIEQNNSL KAHFTAASCD INHLSVNLHA VKMDEEVENA ELSKEGKPKV  480
DAKPNRKTKE YCTELLPRDS PALDTGSEME EKDEDVSAEE INTVDSESRN KFDVDSTKDS  540
EVINEFKDEK KSLSKTASCT TDTENPQVET EEEELPNWRN LYLSGLDERE KVLLDEYSSV  600
LHNYKDVRKK LKEVDQKNRD SFYELASQIK ELKSALAARD EEIQSSRQHL SFIDENKDGN  660
LSEYEASHAI MSPESTLTES IQASPVAAGE GKGEPIENPG EGKRESTEKA GEGKGESIEN  720
PGEGEGESIE NPGEGEGESI KKAGEKSKGD AMQARSLTRS RSILTVEDKI RSDIDELLEE  780
NLAFWLRFST CFHQIQKYQN SVKDLKAELS KMRERKKQEA GGKEEPVGSE ARPIYAHFRE  840
IKTELTLWLE NNAVLKDEVQ CRYSSLCNIQ EEIERISNVS GHEGEPQFNG YQAAKFQGEI  900
INMKQENNKV SNELNAGFDC VKQLKEEVEN LMVELDKEIE AATSKNQQSV SRSRSRIPLR  960
SFLFGIKLKN KWQQKGPSMF ACGHPTLQRQ YSYLTDPTDP S*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012447896.10.0PREDICTED: protein NETWORKED 2A-like
TrEMBLA0A0D2UV260.0A0A0D2UV26_G
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM416934
Publications ? help Back to Top
  1. Paterson AH, et al.
    Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
    Nature, 2012. 492(7429): p. 423-7
    [PMID:23257886]